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JU1498 inf 4



Caenorhabditis species with numbers



Species numbers are assigned by Karin Kiontke. For the last species in the table, they will be assigned as soon as we know for certain that these are new species.

Species

Reference strain

Repro-duction

Collector

Location

Time collected

Isolated by

Phylogenetic affiliation

Geographic distribution and available isolates (lab)

Inbred strain

Genome sequenced/project

sp. 1

SB341

F/M

S. Wirth

Berlin, Germany

2000?

W. Sudhaus

base of Caenorhabditis

1 single isolate

JU1667

Planned

Félix/Blaxter

sp. 2

DF5070

F/M

S. Wirth

Corsica, France

Oct 2001

W. Sudhaus

Drosophilae group, sister of C. drosophilae

1 single isolate

-

-

sp. 5

JU727

F/M

M.-A. Félix

Chengyang, Guangxi, China

6 May 2005

M.-A. Félix

Briggsae subgroup

Isolates from China, Vietnam (Cutter, Ailion, Félix)

JU800

Cutter/Blaxter

@Wormbase

sp. 6

EG4788

F/M

M. Ailion, A.-J. Rodrigues

Amares, Portugal.

28 Mar 2007

M. Ailion

Drosophilae supergroup

EG5626

-

sp. 7

JU1199

F/M

M. Herrmann

Begoro, Ghana

Jun 2007

M.-A. Félix

Japonica group

2 isolates from West Africa (Félix)

JU1286

Wash U

CONTAMINATED WITH SP. 9

www.nematodes.org/nematodegenomes/index.php/959_Nematode_Genomes

sp. 8

QX1182

F/M

M. Rockman

Jersey City, NJ, USA

28 Jul 2007

M. Rockman

Angaria group

Isolates from USA, Switzerland (Braendle)

-

-

sp. 9

JU1325

F/M

M.-A. Félix

Trivandrum Zoo, Kerala, India

21 Dec 2007

M.-A. Félix

Briggsae subgroup

Isolates from various equatorial places from Congo to Singapore (Ailion, Félix, Inoue)

JU1422

Wash U (contaminated genomic, cDNAs OK),

Barbara Meyer

@Wormbase

sp. 10

JU1333

F/M

M.-A. Félix

Angela Spice Garden, Kerala, India

27 Dec 2007

M.-A. Félix

Brenneri subgroup

6 isolates from South India

JU1771

-

sp. 11

JU1373

H/M

V. Robert, L. Sablé

Saint-Benoît, La Réunion

Jan 2008

M.-A. Félix

Brenneri subgroup

Common in tropical regions, from French Polynesia, America to La Reunion (not so far on African continent or Asia)

N.A.

Wash U

@Wormbase

sp. 12

JU1426

F/M

P. Châtelet

Nouragues Forest, French Guyana

May 2008

M.-A. Félix

Angaria group

2 isolates from French Guiana

JU1956

-

sp. 13

JU1528

F/M

M.-A. Félix

Orsay apple orchard

9 Sep 2008

M.-A. Félix

Drosophilae supergroup

A few isolates, all from Orsay, France

JU1968

-

sp. 14

EG5716

F/M

D. Ailion

Moorea, French Polynesia

24 Jul 2009

M. Ailion

Japonica group

Polynesia

Guadeloupe (Félix, Braendle)

-

sp. 15

QG122

F/M

M. Rockman

Near Hanalei Bay, Kauai, Hawaii, USA

2 Aug 2009

M. Rockman

Elegans supergroup

-

sp. 16

JU1873

F/M

J.-B. Pénigault

Sanda Center, Bali, Indonesia

11 Nov 2009

J.-B. Pénigault

Brenneri subgroup

2 isolates from Indonesia (Félix)

JU1898

Planned

Félix/Blaxter

sp. 17

JU1825

F/M

C. Braendle, M.-A. Félix

Nouragues Forest, French Guyana

21 Nov 2009

C. Braendle, M.-A. Félix

Japonica group

Many isolates from French Guiana

JU2079

-

sp. 18

JU1857

F/M

C. Braendle, M.-A. Félix

Nouragues Forest, French Guyana

23 Nov 2009

C. Braendle, M.-A. Félix

Japonica group

A few isolates from Nouragues, French Guiana

JU2083

-

sp. 19

EG6142

F/M

S. Dalton

El Yunque, Puerto Rico

28 Mar 2010

S. Dalton, M. Ailion

Japonica group

-

sp. 20

NIC113

F/M

C. Braendle

Soufrière Forest trail, Guadeloupe

Mar 2010

C. Braendle

Drosophilae supergroup

-

sp. 21

NIC134

F/M

C. Gimond

Island of Sainte Marie, Madagascar

Dec 2010

C. Braendle

possible first branch of Caenorhabditis

Also from Polynesia & Thailand (Félix).Does not seem to grow on OP50.

-

-

sp. 23

VX88

F/M

J. Wang

Jiufeng Village, Wuhan City, Hubei , China

27 Oct 2009

J. Wang

Briggsae subgroup

sister of C. remanei*

Several isolates from China (Cutter)

sp. 24

QG555

F/M

A. Paaby

Santa Barbara, California, USA

July 2011

A. Paaby

Angaria group, sister of C. sp. 8

-

sp. 25

ZF1222

F/M

A. Seah, T. Inoue

Singapore

3 Sep 2011

T. Inoue

Japonica group?

Two isolates from Singapore

ongoing (Inoue)

-

sp. 26

JU2161

F/M

M.-A. Félix

Zanzibar, Tanzania

9 Mar 2012

M.-A. Félix

Briggsae subgroup, sister of C. sp. 5

5 isolates from Zanzibar

ongoing

(Félix)

-

sp. 27

QX2263

F/M

Buenos Aires, Argentina

2 Mar 2012

E. Andersen

likely Drosophilae supergroup

sp. 28

QG702

M. Rockman

Barro Colorado Island, Panama

23 Apr 2012

M. Rockman

Japonica group

sp. 29

QG704

M. Rockman

Barro Colorado Island, Panama

25 Apr 2012

M. Rockman

Japonica group

**

QG714

M. Rockman

Barro Colorado Island, Panama

24 Apr 2012

M. Rockman

Angaria group

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